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| EUR | SVK | 1990 - 1999 | Points | Logo | CL | CWC | UC | Chp | CW |
| 104 | 1 | ŠK Slovan Bratislava | 444,45 |
|
5 | 3 | |||
| 199 | 2 | FK Inter Bratislava | 307,94 |
|
1 | ||||
| 208 | 3 | FC VSS Košice † | 300,71 |
|
2 | 1 | |||
| 240 | 4 | FC Spartak Trnava | 272,56 |
|
1 | ||||
| 296 | 5 | 1. FC Tatran Prešov | 239,10 |
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| 339 | 6 | FC DAC Dunajská Streda | 213,67 |
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| 380 | 7 | MFK Dukla Banská Bystrica | 193,28 |
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| 440 | 8 | FC Nitra | 167,51 |
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| 598 | 9 | MŠK Žilina FK 1908 | 128,35 |
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| 641 | 10 | ŠK Futura Humenné † | 117,99 |
|
1 | ||||
| 705 | 11 | FC Lokomotíva Košice | 101,96 |
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| 766 | 12 | FC Baník Prievidza | 89,35 |
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| 778 | 13 | FC Petržalka | 87,82 |
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| 828 | 14 | Partizán Bardejov | 79,11 |
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| 832 | 15 | FK AS Trenčín | 78,40 |
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| 838 | 16 | MFK Ružomberok | 77,57 |
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| 894 | 17 | MŠK Rimavská Sobota | 70,21 |
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| 930 | 18 | FK Dubnica nad Váhom | 66,27 |
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| 19 | FK Slovan Levice | 52,01 |
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| 20 | MŠK Púchov | 48,60 |
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